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Nuclei Segmentation in Histopathology Images

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Nuclei Segmentation in Histopathology Images

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Research papers and publications in this area

SwiftMSeg: lightweight multi-scale local–global context modeling with transformer for medical image segmentation
2026
SwiftMSeg: lightweight multi-scale local–global context modeling with transform…

Jahid Hasan Rony, Md Shakhawat Hossain & Fazlul Hasan Siddiqui

Scientific Reports (Nature)

Accurate medical image segmentation requires both fine boundary localization and robust contextual understanding, which is often difficult to achieve simultaneously, particularly in lightweight architectures. …

SiNuS: A Comprehensive Dataset for Singular Nuclei Segmentation for HER2 Grading of Breast Cancer
2026
SiNuS: A Comprehensive Dataset for Singular Nuclei Segmentation for HER2 Gradin…

Md Shakhawat Hossain, Md Sahilur Rahman, Munim Ahmed

Data in Brief

Singular nuclei are those that are intact and do not overlap with neighboring nuclei. According to the American Society of Clinical Oncology and the …

Region of interest (ROI) selection using vision transformer for automatic analysis using whole slide images
2023
Region of interest (ROI) selection using vision transformer for automatic analy…

Md Shakhawat Hossain, Galib Muhammad Shahriar, MM Mahbubul Syeed, Mohammad Faisal Uddin, Mahady Has…

Scientific Reports (Nature) , Vol. 13 (1)

Selecting regions of interest (ROI) is a common step in medical image analysis across all imaging modalities. An ROI is a subset of an …

The perception of health professionals in Bangladesh toward the digitalization of the health sector
2022
The perception of health professionals in Bangladesh toward the digitalization …

Md Shakhawat Hossain, MM Mahbubul Syeed, Kaniz Fatema, Mohammad Faisal Uddin

International Journal of Environmental Research and Public Health , Vol. 19 (20)

Bangladesh is undertaking a major transformation towards digitalization in every sector, and healthcare is no exception. Digitalization of the health sector is expected to …

Singular Nuclei Segmentation for Automatic HER2 Quantification Using CISH Whole Slide Images
2022
Singular Nuclei Segmentation for Automatic HER2 Quantification Using CISH Whole…

Md Shakhawat Hossain, MM Mahbubul Syeed, Kaniz Fatema, Md Sakir Hossain, Mohammad Faisal Uddin

Sensors , Vol. 22 (19)

Human epidermal growth factor receptor 2 (HER2) quantification is performed routinely for all breast cancer patients to determine their suitability for

Automatic quantification of HER2 gene amplification in invasive breast cancer from chromogenic in situ hybridization whole slide images
2019
Automatic quantification of HER2 gene amplification in invasive breast cancer f…

Md Shakhawat Hossain, Matthew G Hanna, Naohiro Uraoka, Tomoya Nakamura, Marcia Edelweiss, Edi Brogi…

Journal of Medical Imaging , Vol. 6 (4)

Human epidermal growth factor receptor 2 (HER2), a transmembrane tyrosine kinase receptor encoded by the ERBB2 gene on chromosome 17q12, is a predictive and prognostic biomarker …

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